STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00382.1InterPro IPR007165; KEGG: geo:Geob_1058 membrane protein of unknown function; SPTR: A3J497 Putative uncharacterized protein; PFAM: membrane protein of unknown function. (111 aa)    
Predicted Functional Partners:
SMB98212.1
Phage shock protein C (PspC) family protein; InterPro IPR007168; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; KEGG: sde:Sde_0743 sodium:galactoside symporter; SPTR: A1ZT51 PspC domain family; PFAM: PspC domain protein.
  
    0.759
SMC00430.1
Phage shock protein C (PspC) family protein; SPTR: A3HZC8 Putative uncharacterized protein.
  
    0.759
SMC00383.1
Arginase/agmatinase/formiminoglutamase; InterPro IPR005924:IPR006035; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; KEGG: ank:AnaeK_1264 arginase/agmatinase/formiminoglutamase; SPTR: A3J293 Arginase/agmatinase/formiminoglutamase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
       0.559
SMB88129.1
KEGG: sus:Acid_4095 hypothetical protein; SPTR: A1ZXY2 Putative uncharacterized protein.
  
  
 0.460
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.