STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB94635.1KEGG: bba:Bd3135 hypothetical protein; SPTR: Q8TSJ0 Putative uncharacterized protein. (266 aa)    
Predicted Functional Partners:
SMB94638.1
Aminopeptidase P. Metallo peptidase. MEROPS family M24B; InterPro IPR007865:IPR000994:IPR001131; COGs: COG0006 Xaa-Pro aminopeptidase; KEGG: pmy:Pmen_0325 peptidase M24; SPTR: A2U2G4 Metallopeptidase family M24; PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; Belongs to the peptidase M24B family.
    
  0.515
SMC00384.1
CheC, inhibitor of MCP methylation; InterPro IPR007597; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; KEGG: rpc:RPC_4614 CheC, inhibitor of MCP methylation; SPTR: B6YX74 Histidine kinase; PFAM: CheC domain protein.
    
   0.446
SMB94629.1
Hypothetical protein; SPTR: A3HYB7 Putative uncharacterized protein.
       0.437
rpmG
LSU ribosomal protein L33P; InterPro IPR001705; KEGG: predicted protein; SPTR: A0M3L3 50S ribosomal protein L33; PFAM: ribosomal protein L33; TIGRFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
       0.437
SMB81679.1
Hypothetical protein; InterPro IPR010916.
  
     0.415
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.