STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB94678.1InterPro IPR001501; COGs: COG0374 Ni Fe-hydrogenase I large subunit; KEGG: sus:Acid_6556 hydrogen:quinone oxidoreductase; SPTR: A4CGP4 Putative cytochrome C3-like [NiFe] hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit. (627 aa)    
Predicted Functional Partners:
SMB94698.1
TIGRFAM: hydrogenase (NiFe) small subunit HydA; InterPro IPR001821; COGs: COG1740 Ni Fe-hydrogenase I small subunit; KEGG: reh:PHG064 putative [NiFe] hydrogenase small subunit; SPTR: A4YFB4 Nickel-iron dehydrogenase small subunit, N-terminal domain protein.
 
 0.999
SMB94653.1
InterPro IPR000671; COGs: COG0680 Ni Fe-hydrogenase maturation factor; KEGG: sus:Acid_6561 hydrogenase maturation protease; SPTR: A4CGN9 Putative [NiFe] hydrogenase-specific C-terminal protease; PFAM: peptidase M52 hydrogen uptake protein; TIGRFAM: hydrogenase maturation protease.
 
 0.963
SMB94726.1
Hydrogenase expression/formation protein HypD; InterPro IPR002780; COGs: COG0409 Hydrogenase maturation factor; KEGG: aba:Acid345_1705 hydrogenase expression/formation protein HypD; SPTR: A4CGN2 Putative [NiFe] hydrogenase expression/formation protein; PFAM: hydrogenase formation HypD protein; TIGRFAM: hydrogenase expression/formation protein HypD.
 
 
 0.924
SMB94717.1
Hydrogenase assembly chaperone hypC/hupF; InterPro IPR001109; COGs: COG0298 Hydrogenase maturation factor; KEGG: aba:Acid345_1706 hydrogenase assembly chaperone HypC/HupF; SPTR: A4CGN6 Hydrogenase expression/formation protein; HypC; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); TIGRFAM: hydrogenase assembly chaperone hypC/hupF.
 
 
 0.916
SMB94712.1
[NiFe] hydrogenase maturation protein HypF; InterPro IPR001792:IPR011125:IPR006070:IPR004421; COGs: COG0068 Hydrogenase maturation factor; KEGG: sun:SUN_1658 hydrogenase maturation protein HypF; SPTR: A1HTY1 (NiFe) hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; TIGRFAM: [NiFe] hydrogenase maturation protein HypF.
 
 
 
 0.910
SMB97417.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; InterPro IPR001450; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; KEGG: mxa:MXAN_5557 putative iron-sulfur binding oxidoreductase; SPTR: A1ZL71 Molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
 0.896
SMB94729.1
Hydrogenase expression/formation protein HypE; InterPro IPR010918:IPR000728:IPR011854; COGs: COG0309 Hydrogenase maturation factor; SPTR: A4CGN3 Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; TIGRFAM: hydrogenase expression/formation protein HypE; KEGG: dat:HRM2_11620 HypE.
 
   
 0.888
SMB94687.1
Hypothetical protein; SPTR: A4CGP5 Putative uncharacterized protein.
       0.757
SMB94688.1
Hypothetical protein; SPTR: A4CGP6 Putative uncharacterized protein.
       0.757
SMB94690.1
Hypothetical protein; SPTR: A4CGP7 Putative uncharacterized protein.
       0.757
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.