STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB94688.1Hypothetical protein; SPTR: A4CGP6 Putative uncharacterized protein. (97 aa)    
Predicted Functional Partners:
SMB94687.1
Hypothetical protein; SPTR: A4CGP5 Putative uncharacterized protein.
       0.783
SMB94690.1
Hypothetical protein; SPTR: A4CGP7 Putative uncharacterized protein.
       0.779
SMB94696.1
Hypothetical protein; SPTR: A4CGP9 Putative uncharacterized protein.
       0.778
SMB94693.1
Hypothetical protein; SPTR: A4CGP8 Putative uncharacterized protein.
       0.773
SMB94698.1
TIGRFAM: hydrogenase (NiFe) small subunit HydA; InterPro IPR001821; COGs: COG1740 Ni Fe-hydrogenase I small subunit; KEGG: reh:PHG064 putative [NiFe] hydrogenase small subunit; SPTR: A4YFB4 Nickel-iron dehydrogenase small subunit, N-terminal domain protein.
       0.773
SMB94678.1
InterPro IPR001501; COGs: COG0374 Ni Fe-hydrogenase I large subunit; KEGG: sus:Acid_6556 hydrogen:quinone oxidoreductase; SPTR: A4CGP4 Putative cytochrome C3-like [NiFe] hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit.
       0.757
SMB94671.1
Hypothetical protein; SPTR: A4CGP2 Putative uncharacterized protein.
       0.451
SMB94675.1
Hypothetical protein; SPTR: A4CGP3 Putative uncharacterized protein.
       0.451
SMB94653.1
InterPro IPR000671; COGs: COG0680 Ni Fe-hydrogenase maturation factor; KEGG: sus:Acid_6561 hydrogenase maturation protease; SPTR: A4CGN9 Putative [NiFe] hydrogenase-specific C-terminal protease; PFAM: peptidase M52 hydrogen uptake protein; TIGRFAM: hydrogenase maturation protease.
       0.445
SMB94657.1
Hypothetical protein; SPTR: A4CGP0 Putative uncharacterized protein.
       0.445
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.