STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB92389.1ABC transporter related; InterPro IPR003439:IPR005074:IPR001140:IPR003593:IPR017940; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; KEGG: vei:Veis_2576 type I secretion system ATPase; SPTR: A4BV67 ABC-type bacteriocin/lantibiotic exporter; SMART: AAA ATPase; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region. (799 aa)    
Predicted Functional Partners:
SMB92396.1
Hypothetical protein; InterPro IPR003997; KEGG: swp:swp_4582 HlyD family secretion protein; SPTR: A0ZFE2 Putative uncharacterized protein.
 
 0.967
SMB92398.1
InterPro IPR003423; COGs: COG1538 Outer membrane protein; KEGG: dat:HRM2_05800 outer membrane efflux protein; SPTR: A1ZFV2 Putative outer membrane efflux protein; PFAM: outer membrane efflux protein.
  
 
  0.808
SMB99221.1
Efflux transporter, RND family, MFP subunit; InterPro IPR003997:IPR006143; COGs: COG1566 Multidrug resistance efflux pump; KEGG: ade:Adeh_4154 secretion protein HlyD; SPTR: A1ZFV0 Secretion protein HlyD; PFAM: secretion protein HlyD family protein; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.756
SMB90892.1
Secretion protein HlyD; InterPro IPR003997; KEGG: mfa:Mfla_2222 secretion protein HlyD; SPTR: A1ZS34 RND efflux membrane fusion protein.
  
 0.756
SMB87283.1
ABC transporter related; InterPro IPR003439:IPR001140:IPR003593:IPR017871:IPR017940; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter; SPTR: A3HYE8 Putative transport ATP-binding protein; SMART: AAA ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region.
  
 
 
0.695
SMB89518.1
ABC transporter related; InterPro IPR003439:IPR003593:IPR017871:IPR017940; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; KEGG: aeh:Mlg_0122 ABC transporter related; SPTR: A3ERZ1 ABC-type multidrug transport system, ATPase and permease component; SMART: AAA ATPase; PFAM: ABC transporter related.
  
 
 
0.690
SMB82043.1
ABC transporter related; InterPro IPR003439:IPR001140:IPR003593:IPR017871:IPR017940; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; KEGG: aba:Acid345_2371 ABC transporter, ATPase subunit; SPTR: A3HYD4 ATPase; SMART: AAA ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region.
  
 
 
0.681
SMB82016.1
ABC transporter related; InterPro IPR003439:IPR001140:IPR003593:IPR017871:IPR017940; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; KEGG: aba:Acid345_1514 ABC transporter, ATPase subunit; SPTR: A1ZKN6 ATPase; SMART: AAA ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region.
  
 
 
0.677
SMB90872.1
ABC transporter related; InterPro IPR003439:IPR001140:IPR003593:IPR017871:IPR017940; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; KEGG: mxa:MXAN_1097 efflux ABC transporter, permease/ATP-binding protein; SPTR: A3HU10 HlyB/MsbA family ABC transporter; SMART: AAA ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region.
  
 
 
0.674
SMB92386.1
Serine/threonine protein kinase; InterPro IPR001245:IPR002290:IPR000719; COGs: COG0515 Serine/threonine protein kinase; SPTR: B7U1M7 Cold-induced CIPK; SMART: serine/threonine protein kinase; tyrosine protein kinase; PFAM: tyrosine protein kinase; KEGG: aca:ACP_1251 non-specific serine/threonine protein kinase.
 
    0.642
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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