STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB97876.1COGs: COG3126 conserved hypothetical protein; SPTR: A6B4U9 Glycoprotein/polysaccharide metabolism; KEGG: atc:AGR_C_4472 hypothetical protein. (148 aa)    
Predicted Functional Partners:
SMB95862.1
Peptidoglycan-binding LysM; InterPro IPR002482; KEGG: avi:Avi_3711 5prime-nucleotidase; SPTR: A9U7J7 Predicted protein (Fragment); SMART: Peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding LysM.
  
    0.748
argS
arginyl-tRNA synthetase; InterPro IPR015945:IPR005148:IPR008909:IPR001412:IPR001278; COGs: COG0018 Arginyl-tRNA synthetase; KEGG: bba:Bd2027 hypothetical protein; SPTR: A3HTQ1 Arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain protein; Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; PRIAM: Arginine--tRNA ligase; TIGRFAM: arginyl-tRNA synthetase.
       0.570
SMB98632.1
Trehalose 6-phosphate synthase; InterPro IPR001830:IPR003337:IPR006379; KEGG: afw:Anae109_3011 HAD family hydrolase; SPTR: A1ZY75 Trehalose-6-phosphate synthase-phosphatase; PFAM: glycosyl transferase family 20; trehalose-phosphatase; COGs: COG0380 Trehalose-6-phosphate synthase; PRIAM: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)., Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB.
   
    0.566
SMC00593.1
Trehalose 6-phosphate synthase; InterPro IPR001830:IPR003337:IPR006379; COGs: COG0380 Trehalose-6-phosphate synthase; KEGG: ank:AnaeK_0483 HAD-superfamily hydrolase, subfamily IIB; SPTR: A1ZY75 Trehalose-6-phosphate synthase-phosphatase; PFAM: glycosyl transferase family 20; trehalose-phosphatase; PRIAM: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)., Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB.
   
    0.566
SMB99475.1
KEGG: mno:Mnod_5263 hypothetical protein.
   
    0.530
SMB96058.1
Flavoprotein WrbA; InterPro IPR008254:IPR005025:IPR010089; COGs: COG0655 Multimeric flavodoxin WrbA; KEGG: gme:Gmet_0771 TrpR binding protein WrbA; SPTR: Q39XL1 Flavoprotein wrbA; PFAM: flavodoxin/nitric oxide synthase; NADPH-dependent FMN reductase; TIGRFAM: flavoprotein WrbA.
   
    0.530
SMB81099.1
KEGG: mno:Mnod_5263 hypothetical protein.
   
    0.530
SMB97874.1
Arginase; InterPro IPR005924:IPR006035; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; KEGG: hypothetical protein; K01476 arginase; SPTR: A3HTQ0 Arginase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
       0.460
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.