STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB94069.1ATPase associated with various cellular activities AAA_5; InterPro IPR011704:IPR003593; COGs: COG1401 GTPase subunit of restriction endonuclease; KEGG: aba:Acid345_3754 ATPase associated with various cellular activities, AAA_5; SPTR: P15005 5-methylcytosine-specific restriction enzyme B; SMART: AAA ATPase; PFAM: ATPase associated with various cellular activities AAA_5. (433 aa)    
Predicted Functional Partners:
SMB94064.1
5-methylcytosine-specific restriction enzyme subunit McrC; COGs: COG4268 McrBC 5-methylcytosine restriction system component; KEGG: aba:Acid345_3753 5-methylcytosine-specific restriction enzyme subunit McrC; SPTR: P15006 Protein mcrC.
 
 
 0.999
SMB92122.1
Restriction modification system DNA specificity domain; InterPro IPR000055; COGs: COG0732 Restriction endonuclease S subunits; KEGG: bba:Bd3695 type I restriction-modification system, S subunit; SPTR: A3HT80 Putative type I restriction enzyme HindVIIP specificity protein; PFAM: restriction modification system DNA specificity domain.
 
  
 0.452
SMB92240.1
Restriction modification system DNA specificity domain; InterPro IPR000055; COGs: COG0732 Restriction endonuclease S subunits; KEGG: par:Psyc_0878 type I restriction modification system methylase; SPTR: Q12WN6 Restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain.
 
  
 0.439
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.