STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB94285.1Carboxypeptidase Ss1. Metallo peptidase. MEROPS family M20D; PRIAM: Aminoacylase; TIGRFAM: amidohydrolase; InterPro IPR011650:IPR002933:IPR010168; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; KEGG: amc:MADE_00571 peptidase M20D, amidohydrolase; SPTR: A1ZDJ9 Thermostable carboxypeptidase 2; PFAM: peptidase M20; peptidase dimerisation domain protein. (439 aa)    
Predicted Functional Partners:
SMB98732.1
Glutamate synthase (NADH) large subunit; InterPro IPR002489:IPR002932:IPR000583:IPR006982; COGs: COG0069 Glutamate synthase domain 2; KEGG: pha:PSHAb0127 glutamate synthase, large subunit, GOGAT; SPTR: A0YCV7 Putative glutamate synthase, ferredoxin-dependent; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II; glutamate synthase; PRIAM: Glutamate synthase (ferredoxin).
    
  0.671
SMB98737.1
InterPro IPR000583; COGs: COG0067 Glutamate synthase domain 1; KEGG: cps:CPS_0761 putative glutamate synthase, ferredoxin-dependent; SPTR: A0YCV7 Putative glutamate synthase, ferredoxin-dependent; PFAM: glutamine amidotransferase class-II; PRIAM: Glutamate synthase (ferredoxin).
    
  0.671
SMB94265.1
InterPro IPR011647; KEGG: geo:Geob_0055 KWG repeat protein; SPTR: A1ZQI3 Lipoprotein, putative; PFAM: KWG Leptospira repeat protein.
       0.545
SMB94292.1
Conserved hypothetical protein; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); KEGG: aba:Acid345_3870 hypothetical protein; SPTR: A2TRR0 Putative uncharacterized protein.
  
    0.528
SMC00003.1
InterPro IPR001451:IPR001424; COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; KEGG: mxa:MXAN_6779 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; SPTR: A3J1F5 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PRIAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.
 
  
 0.423
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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