STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB91843.1PEBP family protein; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: swi:Swit_5288 PEBP family protein; SPTR: A0Y7Q7 Oxidoreductase, putative. (368 aa)    
Predicted Functional Partners:
SMB88053.1
Cytochrome c class I; InterPro IPR003088:IPR001563:IPR009056; COGs: COG2010 Cytochrome c mono- and diheme variants; KEGG: eba:ebA2883 cytochrome c subunit of cbb3 type cytochrome oxidase; SPTR: A4AQX1 L-sorbosone dehydrogenase; PFAM: cytochrome c class I.
   
  0.533
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.