STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB96619.1Anti-sigma-factor antagonist; InterPro IPR002645:IPR003658; KEGG: dat:HRM2_41220 RsbV; SPTR: A1ZI72 Anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. (112 aa)    
Predicted Functional Partners:
SMB96617.1
KEGG: sfu:Sfum_4032 putative anti-sigma regulatory factor, serine/threonine protein kinase; SPTR: A1ZI73 Putative uncharacterized protein.
 
 0.987
SMB96620.1
Protein serine/threonine phosphatase; InterPro IPR010822:IPR001932; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; KEGG: aca:ACP_1964 regulator of sigma-B activity, putative; SPTR: A1ZLH1 Serine phosphatase, putative; SMART: protein phosphatase 2C domain protein; PFAM: Stage II sporulation E family protein.
 
 0.985
SMB82760.1
InterPro IPR003594; COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); KEGG: aba:Acid345_2515 putative anti-sigma regulatory factor, serine/threonine protein kinase; SPTR: A1ZZU9 Putative uncharacterized protein; PFAM: ATP-binding region ATPase domain protein.
 
 0.934
SMB93192.1
Protein serine/threonine phosphatase; InterPro IPR010822:IPR001932; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; KEGG: aba:Acid345_3068 serine phosphatase; SPTR: A1ZZ66 Putative regulatory protein; SMART: protein phosphatase 2C domain protein; PFAM: Stage II sporulation E family protein.
 
 0.928
SMB98473.1
Multi-sensor hybrid histidine kinase; InterPro IPR004358:IPR003018:IPR013656:IPR013767:IPR003594:IPR0036 61:IPR008207:IPR001789:IPR001610:IPR000014:IPR000700:IPR0 05467; COGs: COG0642 Signal transduction histidine kinase; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; SPTR: A1ZKB7 Sensor protein; SMART: response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; GAF domain protein; ATP-binding region ATPase domain protein; PAS domain containing protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; GA [...]
  
 
 0.889
SMB93608.1
Putative PAS/PAC sensor protein; InterPro IPR013656:IPR000014:IPR000700; KEGG: azo:azo1544 GGDEF/EAL/PAC/PAS-domain-containing protein; SPTR: A3J744 Sensor protein; SMART: PAS domain containing protein; PFAM: PAS fold-4 domain protein; TIGRFAM: PAS sensor protein.
  
 
 0.849
SMB98154.1
Multi-sensor hybrid histidine kinase; InterPro IPR004358:IPR013655:IPR001789:IPR013767:IPR013656:IPR0035 94:IPR003661:IPR001610:IPR000014:IPR008207:IPR000700:IPR0 05467; COGs: COG0642 Signal transduction histidine kinase; KEGG: tdn:Suden_0219 multi-sensor hybrid histidine kinase; SPTR: A3HWD5 Sensor protein; SMART: response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; ATP-binding region ATPase domain protein; PFAM: response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain pr [...]
  
 
 0.849
SMB79968.1
PAS/PAC sensor hybrid histidine kinase; InterPro IPR004358:IPR013655:IPR001789:IPR013656:IPR013767:IPR0035 94:IPR003661:IPR001610:IPR000014:IPR000700:IPR005467; COGs: COG0642 Signal transduction histidine kinase; KEGG: cak:Caul_0720 multi-sensor hybrid histidine kinase; SPTR: A4BZQ5 Sensor protein; SMART: response regulator receiver; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 do [...]
  
 
 0.849
SMC00483.1
ABC transporter related; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; KEGG: glo:Glov_3182 ABC transporter related; SPTR: A1ZL19 ABC transporter ATP-binding protein; SMART: AAA ATPase; PFAM: ABC transporter related.
   
  0.848
SMB97137.1
Mammalian cell entry related domain protein; InterPro IPR003399; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; KEGG: gur:Gura_3705 hypothetical protein; SPTR: A1ZPY6 Mce related protein; PFAM: Mammalian cell entry related domain protein.
  
  0.830
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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