STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB85443.1KEGG: psa:PST_1474 chemotaxis protein MotB-related protein. (224 aa)    
Predicted Functional Partners:
SMC00254.1
Competence/damage-inducible protein cinA; InterPro IPR001453:IPR008136:IPR008135; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; KEGG: dal:Dalk_4012 competence/damage-inducible protein CinA; SPTR: A1ZUS5 Competence-damage inducible protein; PFAM: CinA domain protein; molybdopterin binding domain; TIGRFAM: competence/damage-inducible protein CinA.
    
  0.515
SMB82128.1
OmpA/MotB domain protein; InterPro IPR001035:IPR006664:IPR006665:IPR011659:IPR013026; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; KEGG: hypothetical protein; K03640 peptidoglycan-associated lipoprotein; SPTR: A3HXW3 OmpA family protein; PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller.
  
   0.500
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.497
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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