STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB93093.1Beta-lactamase domain protein; InterPro IPR001279; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: mpo:Mpop_4636 beta-lactamase domain protein; SPTR: A2UAT4 Beta-lactamase-like; PFAM: beta-lactamase domain protein. (336 aa)    
Predicted Functional Partners:
SMB84771.1
UBA/THIF-type NAD/FAD binding protein; InterPro IPR007901:IPR000594:IPR001763:IPR001307; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; KEGG: cbc:CbuK_0743 molybdopterin biosynthesis MoeB protein; SPTR: A1ZVV1 Molybdopterin biosynthesis protein; SMART: Rhodanese domain protein; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein.
  
 0.681
SMC00457.1
KEGG: bha:BH1193 hypothetical protein; SPTR: A3HZE4 Putative uncharacterized protein.
  
    0.564
SMB90736.1
InterPro IPR007760; COGs: COG3546 Mn-containing catalase; KEGG: bha:BH1069 Mn catalase; SPTR: Q6I814 Pseudocatalase; PFAM: manganese containing catalase.
  
     0.494
SMB91165.1
Beta-lactamase domain protein; InterPro IPR001279:IPR001763:IPR001307; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: sus:Acid_7272 beta-lactamase domain-containing protein; SPTR: A3XIX1 Rhodanese-like protein; SMART: Rhodanese domain protein; PFAM: beta-lactamase domain protein.
   
  0.484
SMC00222.1
KEGG: mch:Mchl_3369 hypothetical protein.
  
     0.473
SMB97197.1
Hypothetical protein; InterPro IPR011756; KEGG: sus:Acid_7531 hypothetical protein; SPTR: P94560 Stress response protein ysnF.
  
     0.456
SMB97193.1
KEGG: bph:Bphy_4579 hypothetical protein; SPTR: B9TMZ5 Putative uncharacterized protein.
  
     0.454
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
 
 0.452
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
    
   0.451
SMB95093.1
Chalcone and stilbene synthase domain protein; InterPro IPR012328:IPR013747:IPR001099; COGs: COG3424 naringenin-chalcone synthase; KEGG: pin:Ping_0256 naringenin-chalcone synthase; SPTR: A1ZN71 Naringenin-chalcone synthase; PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein.
    
   0.451
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.