STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB93157.1Phenazine biosynthesis protein PhzF family; InterPro IPR003719; COGs: COG0384 epimerase PhzC/PhzF homolog; KEGG: hch:HCH_01287 epimerase, PhzC/PhzF-like protein; SPTR: A4CFQ4 Putative uncharacterized protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; TIGRFAM: phenazine biosynthesis protein PhzF family. (267 aa)    
Predicted Functional Partners:
SMB93155.1
Hypothetical protein.
       0.773
SMB93146.1
Methyltransferase type 12; InterPro IPR013216:IPR013217; KEGG: scl:sce5872 putative SAM-dependent methyltransferase; SPTR: A3U729 Hypothetical SAM-dependent methyltransferase; PFAM: Methyltransferase type 12; Methyltransferase type 11.
 
      0.530
SMB93152.1
Hypothetical protein; SPTR: A1ZTA5 Probable aggregation factor core protein MAFp3, isoform C, putative.
       0.524
SMB93160.1
Hypothetical protein; InterPro IPR017937; KEGG: mms:mma_0210 hypothetical protein.
       0.429
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.