STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB79278.1KEGG: hypothetical protein; SPTR: A9VBW9 Predicted protein. (239 aa)    
Predicted Functional Partners:
SMB79276.1
Hypothetical protein.
       0.528
SMB79266.1
Hypothetical protein; KEGG: ecx:EcHS_A2646 P-type conjugative transfer protein TrbL; SPTR: A0EVL5 Conjugal transfer protein.
       0.497
SMB79271.1
COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: hypothetical protein; SPTR: A4VC59 Putative uncharacterized protein.
       0.497
SMB79273.1
Hypothetical protein.
       0.497
SMB79264.1
KEGG: azc:AZC_4206 hypothetical protein.
       0.454
SMB79262.1
Hypothetical protein.
       0.433
SMB79261.1
Hypothetical protein.
       0.405
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.