STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB79386.1Filamentation induced by cAMP protein Fic; InterPro IPR003812; COGs: COG2184 Protein involved in cell division; KEGG: btr:Btr_2350 hypothetical protein; SPTR: A5KRY5 Filamentation induced by cAMP protein Fic; PFAM: filamentation induced by cAMP protein Fic. (375 aa)    
Predicted Functional Partners:
SMB79367.1
SPTR: A3XJ17 Mobilization protein B.
 
     0.798
SMB79384.1
Hypothetical protein.
       0.773
SMB79370.1
COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: nmu:NmulC_2793 TraG protein; SPTR: A3XJ18 Mobilisation protein C.
 
     0.744
SMB79396.1
Hypothetical protein.
       0.718
SMC00686.1
Initiator RepB protein; InterPro IPR000525; COGs: COG5527 Protein involved in initiation of plasmid replication; KEGG: abm:p1ABSDF0001 putative replication protein; SPTR: A5H870 RepAci1; PFAM: initiator RepB protein.
  
     0.540
SMB79356.1
COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: mno:Mnod_8771 ATPase involved in chromosome partitioning-like protein; SPTR: A0P4E5 Stability/partitioning determinant.
  
     0.536
SMB79262.1
Hypothetical protein.
  
     0.511
SMC00632.1
Filamentation induced by cAMP protein Fic; InterPro IPR003812; COGs: COG2184 Protein involved in cell division; KEGG: tgr:Tgr7_3297 mobile mystery protein B; SPTR: B7QIN5 FIC domain-containing protein, putative; PFAM: filamentation induced by cAMP protein Fic.
  
     0.511
SMB79271.1
COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: hypothetical protein; SPTR: A4VC59 Putative uncharacterized protein.
 
     0.498
SMB99422.1
Protein of unknown function DUF559; InterProIPR000212:IPR007569:IPR000938:IPR014016:IPR 014017:IPR006650; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); KEGG: dde:Dde_1588 ATP-dependent DNA helicase UvrD; SPTR: A1ZN69 UvrD/REP helicase domain protein, putative; PFAM: protein of unknown function DUF559; UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
  
     0.494
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.