STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB84990.1Glycosyl hydrolase family 1; InterPro IPR001360; COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; KEGG: pzu:PHZ_p0098 glycoside hydrolase, family 1; SPTR: A8M9E1 Glycoside hydrolase family 1; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family. (445 aa)    
Predicted Functional Partners:
SMB97689.1
Alpha-glucosidase; InterPro IPR000322; COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; KEGG: aba:Acid345_0650 alpha-glucosidase; SPTR: A2TTB6 Alpha-glucosidase, family 31 of glycosyl hydrolase; PFAM: glycoside hydrolase family 31; PRIAM: Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 0.842
SMB96440.1
KEGG: psa:PST_2891 glycosyltransferase; SPTR: B9TDP7 Putative uncharacterized protein (Fragment).
  
  0.840
SMB96460.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
  0.836
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
   
 
 0.809
SMB98981.1
Glycoside hydrolase family 2 sugar binding; InterPro IPR006104:IPR006103; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; KEGG: scl:sce3052 glycoside hydrolase family protein; SPTR: Q5B8D0 Putative uncharacterized protein; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.770
SMB85003.1
KEGG: noc:Noc_0466 hypothetical protein.
 
     0.756
SMB98799.1
Beta-galactosidase; InterPro IPR001360:IPR017736; COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; KEGG: rfr:Rfer_1111 beta-glucosidase; SPTR: Q08638 Beta-glucosidase A; PFAM: glycoside hydrolase family 1; PRIAM: Beta-glucosidase; TIGRFAM: beta-galactosidase.
  
  
  0.714
SMB84995.1
Gluconate 2-dehydrogenase (acceptor); InterPro IPR006076:IPR000172; COGs: COG2303 Choline dehydrogenase and related flavoprotein; KEGG: mrd:Mrad2831_0664 gluconate 2-dehydrogenase (acceptor); SPTR: A4LIU7 GMC oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; PRIAM: Gluconate 2-dehydrogenase (acceptor).
 
  
  0.705
SMB90907.1
Major facilitator superfamily MFS_1; InterPro IPR001958:IPR011701:IPR007114:IPR005829; SPTR: A4SH33 TetA; PFAM: major facilitator superfamily MFS_1; KEGG: sal:Sala_2776 major facilitator transporter.
  
     0.704
SMB90652.1
Alpha-glucosidase; InterPro IPR000322:IPR017871; COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; KEGG: cja:CJA_3248 alpha-glucosidase, putative, adg31B; SPTR: A1ZKD2 Glycosyl hydrolase, family 31; PFAM: glycoside hydrolase family 31; PRIAM: Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 0.638
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.