STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB85197.1Cyanophycinase; InterPro IPR005320:IPR011811; COGs: COG4242 Cyanophycinase and related exopeptidase; KEGG: csa:Csal_1113 cyanophycinase; SPTR: A3J5D0 Cyanophycinase; PFAM: peptidase S51 dipeptidase E; PRIAM: Cyanophycinase; TIGRFAM: cyanophycinase; Belongs to the peptidase S51 family. (268 aa)    
Predicted Functional Partners:
SMB97612.1
Cyanophycin synthetase; InterProIPR000115:IPR013651:IPR004101:IPR013221:IPR 011761:IPR001645:IPR011810; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; KEGG: csa:Csal_1114 cyanophycin synthetase; SPTR: A3J5C9 Cyanophycin synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; RimK domain protein ATP-grasp; phosphoribosylglycinamide synthetase; TIGRFAM: cyanophycin synthetase; Belongs to the MurCDEF family.
 
   
 0.855
SMB85215.1
Membrane protein involved in aromatic hydrocarbon degradation; InterPro IPR005017; COGs: COG2067 Long-chain fatty acid transport protein; KEGG: mxa:MXAN_7040 putative outer membrane protein P1; SPTR: A3J495 Long-chain fatty acid transport protein, outer membrane protein; PFAM: membrane protein involved in aromatic hydrocarbon degradation.
       0.470
SMB85184.1
Ion transport protein; InterPro IPR005821; KEGG: nmu:Nmul_A1615 ion transport protein; SPTR: Q8PVR4 Potassium channel protein; PFAM: Ion transport protein.
       0.469
SMB85219.1
KEGG: aba:Acid345_3984 hypothetical protein; SPTR: A1ZWS4 Putative outer membrane protein.
       0.430
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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