STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB99956.1InterPro IPR002559; KEGG: tdn:Suden_1713 transposase IS4; SPTR: A1ZSG8 Transposase, IS4; PFAM: transposase IS4 family protein. (221 aa)    
Predicted Functional Partners:
SMB99957.1
Hypothetical protein; KEGG: nar:Saro_2565 putative transmembrane protein; SPTR: A3RNN1 Putative uncharacterized protein.
       0.773
SMB99955.1
Hypothetical protein.
       0.718
SMB89544.1
KEGG: lpf:lpl2868 hypothetical protein; SPTR: Q2FSY7 Transposase, IS4.
  
     0.628
SMB99954.1
InterPro IPR000792; KEGG: lch:Lcho_1782 two component LuxR family transcriptional regulator; SPTR: A1ZG53 Transcriptional regulator, LuxR family protein; SMART: regulatory protein LuxR; PFAM: regulatory protein LuxR.
       0.571
SMB99958.1
Metallophosphoesterase; InterPro IPR004843; KEGG: similar to Acid phosphatase 5, tartrate resistant; SPTR: A4CJ28 Putative uncharacterized protein; PFAM: metallophosphoesterase.
       0.510
SMB99515.1
Radical SAM domain protein; InterPro IPR007197; COGs: COG0535 Fe-S oxidoreductase; KEGG: pla:Plav_2003 hypothetical protein; SPTR: A1ZYM9 Radical SAM domain protein; PFAM: Radical SAM domain protein.
  
     0.402
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.