STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB81077.1KEGG: cja:CJA_1210 hypothetical protein; SPTR: A4VC41 Putative uncharacterized protein. (241 aa)    
Predicted Functional Partners:
SMB81060.1
Domain of unknown function DUF1814; InterPro IPR014942; COGs: COG2253 conserved hypothetical protein; KEGG: cja:CJA_1209 hypothetical protein; SPTR: A4VC40 Putative uncharacterized protein; PFAM: Domain of unknown function DUF1814.
 
   
 0.958
SMC00436.1
Hypothetical protein.
  
     0.497
SMC00609.1
KEGG: sus:Acid_2014 hypothetical protein; SPTR: A1ZKQ1 Putative uncharacterized protein.
  
     0.496
SMB81079.1
KEGG: mrd:Mrad2831_0664 gluconate 2-dehydrogenase (acceptor); SPTR: A4LIU7 GMC oxidoreductase.
       0.487
SMB98408.1
Hypothetical protein; InterPro IPR002016.
  
     0.425
SMB82266.1
Hypothetical protein; SPTR: A3HVD1 Putative uncharacterized protein.
  
     0.417
SMB81089.1
KEGG: xac:XAC2128 2-keto-gluconate dehydrogenase; SPTR: A2WIV9 Choline dehydrogenase.
       0.415
SMC00437.1
TonB-dependent receptor plug; InterPro IPR000531:IPR012910; COGs: COG4206 Outer membrane cobalamin receptor protein; KEGG: mxa:MXAN_4746 TonB-dependent receptor; SPTR: A3U5G1 Putative outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor.
  
     0.403
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.