STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB81243.1Efflux transporter, RND family, MFP subunit; InterPro IPR001036:IPR006143; COGs: COG0841 Cation/multidrug efflux pump; KEGG: sus:Acid_7568 acriflavin resistance protein; SPTR: A2W5H8 Cation/multidrug efflux pump; PFAM: acriflavin resistance protein; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (1411 aa)    
Predicted Functional Partners:
SMB81252.1
InterPro IPR003423; COGs: COG1538 Outer membrane protein; KEGG: bmj:BMULJ_03537 RND efflux system outer membrane lipoprotein; SPTR: A2W0A6 Outer membrane protein; PFAM: outer membrane efflux protein.
  
  0.840
SMB90317.1
Efflux transporter, RND family, MFP subunit; InterPro IPR006143; COGs: COG0845 Membrane-fusion protein; KEGG: pmy:Pmen_1921 RND family efflux transporter MFP subunit; SPTR: A3HY84 Putative HlyD-family efflux transporter component; PFAM: secretion protein HlyD family protein; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.790
SMB80435.1
Heavy metal efflux pump, CzcA family; InterPro IPR001036:IPR003423:IPR004763; COGs: COG3696 Putative silver efflux pump; KEGG: ajs:Ajs_1849 CzcA family heavy metal efflux protein; SPTR: A1ZCV7 Cation efflux system protein, AcrB/AcrD/AcrF family protein; PFAM: acriflavin resistance protein; outer membrane efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
0.678
SMB91907.1
Heavy metal efflux pump, CzcA family; COGs: COG3696 Putative silver efflux pump; KEGG: mpo:Mpop_4083 heavy metal efflux pump, CzcA family; SPTR: A4CH05 Putative transport-related, membrane protein.
 
 0.644
SMB92523.1
Efflux transporter, RND family, MFP subunit; InterPro IPR006143; COGs: COG0845 Membrane-fusion protein; KEGG: sus:Acid_5519 RND family efflux transporter MFP subunit; SPTR: A3XIX9 Putative membrane protein; PFAM: secretion protein HlyD family protein; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
0.623
SMB98580.1
Efflux transporter, RND family, MFP subunit; InterPro IPR006143; COGs: COG0845 Membrane-fusion protein; KEGG: bac:BamMC406_5741 RND family efflux transporter MFP subunit; SPTR: A2W5H9 Secretion protein HlyD; PFAM: secretion protein HlyD family protein; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
0.622
SMB85994.1
Efflux transporter, RND family, MFP subunit; InterPro IPR006143; COGs: COG0845 Membrane-fusion protein; KEGG: gbm:Gbem_3852 efflux transporter, RND family, MFP subunit; SPTR: A1ZGL8 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
0.622
SMB92525.1
InterPro IPR003423; COGs: COG1538 Outer membrane protein; KEGG: sus:Acid_5886 outer membrane efflux protein; SPTR: A3XIX7 Putative outer membrane protein; PFAM: outer membrane efflux protein.
 
  0.608
SMB95207.1
Efflux transporter, RND family, MFP subunit; InterPro IPR006143; COGs: COG0845 Membrane-fusion protein; KEGG: mfa:Mfla_0374 secretion protein HlyD; SPTR: A3XM46 Efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.568
SMB99383.1
Efflux transporter, RND family, MFP subunit; SPTR: A3I052 Membrane-fusion protein; PFAM: secretion protein HlyD family protein; TIGRFAM: efflux transporter, RND family, MFP subunit; InterPro IPR006143; COGs: COG0845 Membrane-fusion protein; KEGG: sfu:Sfum_1458 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
0.555
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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