STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00443.1CMP/dCMP deaminase zinc-binding; InterPro IPR002125:IPR016192; COGs: COG0590 Cytosine/adenosine deaminase; KEGG: bsu:BSU13170 guanine deaminase; SPTR: A3XP18 Guanine deaminase; PFAM: CMP/dCMP deaminase zinc-binding. (158 aa)    
Predicted Functional Partners:
SMB88202.1
[2Fe-2S]-binding domain protein; InterPro IPR001041:IPR005107:IPR002346:IPR002888:IPR006058; COGs: COG4630 Xanthine dehydrogenase iron-sulfur cluster and FAD-binding subunit A; KEGG: spe:Spro_2300 xanthine dehydrogenase small subunit; SPTR: A1ZVS8 Xanthine dehydrogenase, N-terminal subunit; PFAM: [2Fe-2S]-binding domain protein; molybdopterin dehydrogenase FAD-binding; ferredoxin; CO dehydrogenase flavoprotein domain protein.
 
  
  0.871
SMB88208.1
Xanthine dehydrogenase; InterPro IPR008274:IPR000674; COGs: COG4631 Xanthine dehydrogenase molybdopterin-binding subunit B; KEGG: csa:Csal_1788 xanthine oxidase / xanthine dehydrogenase, molybdenum binding subunit apoprotein; SPTR: A1ZVS9 Xanthine dehydrogenase/oxidase; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; PRIAM: Xanthine dehydrogenase.
 
  
  0.870
SMB91130.1
Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.847
SMB97368.1
[2Fe-2S]-binding domain protein; InterPro IPR001041:IPR002888:IPR006058:IPR006311; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; KEGG: mes:Meso_0582 twin-arginine translocation pathway signal; SPTR: A2VUX1 Ferredoxin:[2Fe-2S]-binding; PFAM: [2Fe-2S]-binding domain protein; ferredoxin.
    
  0.844
SMB89618.1
InterPro IPR000836; COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; KEGG: hypoxanthine-guanine phosphoribosyltransferase; SPTR: A5ZKY5 Putative uncharacterized protein; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase.
     
 0.844
hisI
InterPro IPR002496:IPR008179; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; KEGG: amc:MADE_01111 phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase; SPTR: A3HZJ3 Phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; In the N-terminal section; belongs to the PRA-CH family.
   
  
 0.807
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.706
SMB82786.1
Exodeoxyribonuclease III Xth; InterPro IPR005135:IPR000097:IPR004808; COGs: COG0708 Exonuclease III; KEGG: bsu:BSU40880 multifunctional DNA-repair enzyme; SPTR: A5ZDC5 Putative uncharacterized protein; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III.
   
 
 0.704
SMB97373.1
Molybdopterin dehydrogenase FAD-binding; InterPro IPR005107:IPR002346; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; KEGG: bpy:Bphyt_4208 molybdopterin dehydrogenase FAD-binding; SPTR: A3KK71 Putative oxidoreductase, molybdopterin binding subunit; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein.
    
  0.636
SMC00547.1
Molybdopterin dehydrogenase FAD-binding; InterPro IPR005107:IPR002346; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; KEGG: afr:AFE_0808 oxidoreductase, FAD-binding subunit; SPTR: A4AND8 Putative oxidoreductase, molybdopterin binding subunit; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein.
    
  0.636
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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