STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB84628.1KEGG: sde:Sde_1755 hypothetical protein; SPTR: A8NIM0 Putative uncharacterized protein. (68 aa)    
Predicted Functional Partners:
SMB84621.1
KEGG: cak:Caul_1833 hypothetical protein; SPTR: B9TFK8 Putative uncharacterized protein (Fragment).
     0.994
SMB87079.1
Endo-1,4-beta-xylanase; InterPro IPR001000; COGs: COG3693 Beta-1 4-xylanase; KEGG: scl:sce6693 O-glycosyl hydrolase; SPTR: P14768 Endo-1,4-beta-xylanase A; SMART: glycoside hydrolase family 10; PFAM: glycoside hydrolase family 10; PRIAM: Endo-1,4-beta-xylanase.
     0.853
SMB84630.1
Hypothetical protein.
       0.773
SMB84606.1
alpha-L-arabinosidase; COGs: COG3534 Alpha-L-arabinofuranosidase; KEGG: bha:BH1874 alpha-L-arabinosidase; SPTR: A4CJN1 Alpha-L-arabinosidase.
    
  0.764
SMB98635.1
Hypothetical protein; KEGG: sde:Sde_3094 GntR family transcriptional regulator; SPTR: A5ZFT4 Putative uncharacterized protein.
 
 
  0.762
SMB87170.1
Protein of unknown function DUF303 acetylesterase putative; InterPro IPR005181:IPR006104; KEGG: xca:xccb100_2509 exported sialate O-acetylesterase; SPTR: A3HTJ4 Putative sialate O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase putative; glycoside hydrolase family 2 sugar binding.
 
 
   0.733
SMB98266.1
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; KEGG: cja:CJA_2760 cellulase, putative, cel5G; SPTR: A4C1X9 Probable glycosyl hydrolase; InterPro IPR005084:IPR001547:IPR006584; SMART: cellulose binding type IV; PFAM: glycoside hydrolase family 5; Carbohydrate binding family 6; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.526
SMB91795.1
Peptidase S8 and S53 subtilisin kexin sedolisin; InterPro IPR000209; COGs: COG1404 Subtilisin-like serine protease; KEGG: geo:Geob_0072 cell wall/surface repeat protein; SPTR: A1ZLS7 Peptidase S8 and S53, subtilisin, kexin, sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin.
   
  0.487
SMC00568.1
Glycoside hydrolase family 43; InterPro IPR006710; KEGG: sde:Sde_0789 endo-1,4-beta-xylanase D precursor; SPTR: A3XLS3 Endo-1,4-beta-xylanase D; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.479
SMC00272.1
Cell divisionFtsK/SpoIIIE; InterPro IPR002543; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; KEGG: hap:HAPS_0320 DNA translocase FtsK involved in cell division, DNA segregation ATPase FtsK; SPTR: A1ZGI7 Ftsk/spoiiie family cell division protein; PFAM: cell divisionFtsK/SpoIIIE.
    
   0.471
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.