STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB84681.1KEGG: aci:ACIAD3520 hypothetical protein; SPTR: A3I326 Putative uncharacterized protein. (541 aa)    
Predicted Functional Partners:
SMB94331.1
KEGG: mfa:Mfla_1193 hypothetical protein.
  
   0.602
SMB98355.1
KEGG: lpp:lpp0035 hypothetical protein; SPTR: A4CNQ9 Putative uncharacterized protein.
  
     0.549
SMB87857.1
Hypothetical protein; KEGG: smt:Smal_1376 TonB-dependent outer membrane receptor; SPTR: A4BZX3 Putative uncharacterized protein.
  
 
   0.510
SMB84990.1
Glycosyl hydrolase family 1; InterPro IPR001360; COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; KEGG: pzu:PHZ_p0098 glycoside hydrolase, family 1; SPTR: A8M9E1 Glycoside hydrolase family 1; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
  
   0.490
SMC00442.1
Conserved repeat domain protein; InterPro IPR001434; KEGG: sfu:Sfum_2371 hypothetical protein; SPTR: A1ZZ99 Putative hemagglutinin; TIGRFAM: conserved repeat domain protein.
  
 
   0.448
SMB93353.1
TonB-dependent receptor; InterPro IPR000531; KEGG: mxa:MXAN_4746 TonB-dependent receptor; SPTR: A2TP33 Putative outer membrane protein, probably involved in nutrient binding; PFAM: TonB-dependent receptor.
  
 
   0.448
SMB93365.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: mxa:MXAN_4746 TonB-dependent receptor; SPTR: A4CMA8 Putative outer membrane protein; PFAM: TonB-dependent receptor plug.
  
 
   0.438
SMB93351.1
RagB/SusD domain protein; InterPro IPR012944; SPTR: A3XL35 Putative outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
  
 
   0.435
SMB87116.1
RagB/SusD domain-containing protein; InterPro IPR012944; SPTR: A3HS04 Putative outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
  
 
   0.434
SMB98635.1
Hypothetical protein; KEGG: sde:Sde_3094 GntR family transcriptional regulator; SPTR: A5ZFT4 Putative uncharacterized protein.
   
   0.425
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.