STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB98472.1InterPro IPR001296; COGs: COG0438 Glycosyltransferase; KEGG: ppg:PputGB1_1385 glycosyl transferase group 1; SPTR: A2U3H3 Glycosyl transferase group 1; PFAM: glycosyl transferase group 1. (375 aa)    
Predicted Functional Partners:
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
  
    0.775
SMB96177.1
O-antigen polymerase; InterPro IPR007016; KEGG: tdn:Suden_1699 O-antigen polymerase; SPTR: A2TQU4 Putative uncharacterized protein; PFAM: O-antigen polymerase.
  
 
  0.755
SMB93204.1
Lipopolysaccharide biosynthesis protein; InterPro IPR003856; KEGG: gsu:GSU1855 capsule polysaccharide export protein, putative; SPTR: A4LSB0 Chain length determinant protein; PFAM: lipopolysaccharide biosynthesis protein.
  
    0.755
SMB87291.1
KEGG: reh:PHG111 hypothetical protein; SPTR: A2U3E4 Putative uncharacterized protein.
 
     0.751
SMB93201.1
O-antigen polymerase; InterPro IPR007016; KEGG: sus:Acid_6617 O-antigen polymerase; SPTR: A3ERX2 O antigen polymerase; PFAM: O-antigen polymerase.
  
 
  0.737
SMB90963.1
InterPro IPR001173; COGs: COG1216 glycosyltransferase; KEGG: noc:Noc_2168 glycosyl transferase family protein; SPTR: A2BD33 WsbD; PFAM: glycosyl transferase family 2.
  
    0.732
SMC00454.1
KEGG: aba:Acid345_1371 hypothetical protein; SPTR: Q0W3E4 Putative uncharacterized protein.
  
     0.705
SMB93208.1
Polysaccharide biosynthesis protein; InterPro IPR004268:IPR002797; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; KEGG: hch:HCH_06176 O-antigen and teichoic acid export protein; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; SPTR: Q46FX4 Lipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter).
  
    0.692
SMB99151.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; InterPro IPR003362:IPR017475; KEGG: nmu:Nmul_A2673 undecaprenyl-phosphate galactosephosphotransferase; SPTR: Q2NHK8 Predicted bacterial sugar transferase; PFAM: sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.674
SMC00459.1
Oxidoreductase domain protein; InterPro IPR000683:IPR004104; COGs: COG0673 dehydrogenase and related protein; KEGG: mgm:Mmc1_2424 oxidoreductase domain protein; SPTR: A1ZCI7 WblB protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain.
  
    0.663
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.