STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB99606.1Hypothetical protein; KEGG: aca:ACP_0689 peptidase, M20/M25/M40 family; SPTR: A4A7U8 Peptidase M20. (94 aa)    
Predicted Functional Partners:
SMB80375.1
KEGG: swi:Swit_0915 hypothetical protein; SPTR: A3HS81 Putative uncharacterized protein.
  
     0.755
SMB86311.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.653
SMB98872.1
Dihydroorotate oxidase B, catalytic subunit; InterPro IPR001450:IPR001295:IPR017900:IPR005720; COGs: COG0167 Dihydroorotate dehydrogenase; KEGG: sus:Acid_7660 dihydropyrimidine dehydrogenase; SPTR: A3I8S2 Dihydropyrimidine dehydrogenase; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PRIAM: Dihydropyrimidine dehydrogenase (NADP(+)).
  
 0.610
SMC00588.1
Peptidase S45 penicillin amidase; InterPro IPR002692; COGs: COG2366 Protein related to penicillin acylase; KEGG: sus:Acid_4922 peptidase S45, penicillin amidase; SPTR: A4AW22 Penicillin amidase family protein; PFAM: peptidase S45 penicillin amidase.
  
     0.572
SMB99604.1
Hypothetical protein.
       0.560
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 0.519
SMC00124.1
Peptidase M20; InterPro IPR011650:IPR002933; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; KEGG: pha:PSHAb0171 putative hydrolase; SPTR: A3HXL2 Putative hydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
  
     0.490
SMB93415.1
Amidohydrolase; InterPro IPR011650:IPR002933:IPR010168; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; KEGG: eli:ELI_13895 hypothetical protein; SPTR: A4CND1 Putative uncharacterized protein; PFAM: peptidase dimerisation domain protein; peptidase M20; TIGRFAM: amidohydrolase.
  
  
  0.473
SMB97349.1
InterPro IPR001518; COGs: COG0137 Argininosuccinate synthase; KEGG: mxa:MXAN_5108 argininosuccinate synthase; SPTR: A3XM42 Argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.468
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 
 0.461
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.