STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00621.1Satase isoform II; InterPro IPR001451; COGs: COG1045 Serine acetyltransferase; KEGG: bph:Bphy_3271 satase isoform II; SPTR: A4MEK6 Serine O-acetyltransferase. (179 aa)    
Predicted Functional Partners:
SMB89339.1
Cysteine synthase; InterPro IPR001926:IPR001216:IPR010916:IPR005856:IPR005859; COGs: COG0031 Cysteine synthase; KEGG: mxa:MXAN_1571 cysteine synthase A; SPTR: A5P7E9 Cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; TIGRFAM: cysteine synthase; cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.928
cysS
cysteinyl-tRNA synthetase; InterPro IPR015803:IPR015273:IPR002308; COGs: COG0215 Cysteinyl-tRNA synthetase; KEGG: baa:BA_0678 tRNA synthetases class I (C); SPTR: Q11PK9 Cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; TIGRFAM: cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.860
SMC00618.1
Capsular exopolysaccharide family; InterPro IPR003856:IPR005702; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; KEGG: sun:SUN_1559 capsular polysaccharide biosynthesis protein; SPTR: A5ZCW3 Putative uncharacterized protein; PFAM: lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family.
  
 
 0.841
SMB88276.1
Cystathionine beta-synthase; InterPro IPR001926:IPR001216; COGs: COG0031 Cysteine synthase; KEGG: AGAP012897-PA; SPTR: A1ZHL6 Cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit.
 
 0.837
SMC00725.1
Plasmid recombination protein; InterPro IPR001668; KEGG: dds:Ddes_0434 plasmid recombination protein; SPTR: P15255 65 kDa protein; PFAM: plasmid recombination protein.
  
 0.783
SMC00622.1
Hypothetical protein; KEGG: dps:DPPB76 related to capsular polysaccharide biosynthesis protein; SPTR: A6ASH6 Putative membrane protein.
       0.782
SMB99151.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; InterPro IPR003362:IPR017475; KEGG: nmu:Nmul_A2673 undecaprenyl-phosphate galactosephosphotransferase; SPTR: Q2NHK8 Predicted bacterial sugar transferase; PFAM: sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.708
SMB89268.1
Sugar transferase; InterPro IPR003362; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; KEGG: xfn:XfasM23_1480 undecaprenyl-phosphate glucose phosphotransferase; PFAM: sugar transferase; SPTR: A1ZI79 Capsular polysaccharide biosynthesis protein.
  
 
 0.708
SMB92645.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; InterPro IPR003362:IPR017475; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; KEGG: tgr:Tgr7_2083 undecaprenyl-phosphate galactose phosphotransferase; SPTR: A3J395 Glycosyltransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.708
SMC00617.1
Polysaccharide export protein; InterPro IPR003715; COGs: COG1596 Periplasmic protein involved in polysaccharide export; KEGG: sun:SUN_1557 polysaccharide export system outer membrane protein; SPTR: A2TNP1 Putative membrane protein involved in polysaccharide export; PFAM: polysaccharide export protein.
 
 
  0.706
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.