STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB98070.1NUDIX hydrolase; InterPro IPR000086; KEGG: dal:Dalk_4465 A/G-specific adenine glycosylase; SPTR: A3I086 Orotate phosphoribosyltransferase; PFAM: NUDIX hydrolase. (233 aa)    
Predicted Functional Partners:
SMB98979.1
Hypothetical protein; SPTR: A1ZDE1 Putative uncharacterized protein.
  
     0.684
SMC00262.1
InterPro IPR017871; KEGG: hypothetical protein; SPTR: A1ZF40 Putative uncharacterized protein.
  
     0.660
SMC00531.1
KEGG: scl:sce8624 putative acyl-protein synthetase, LuxE; SPTR: A1ZQF0 Putative uncharacterized protein.
  
     0.642
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.620
SMC00254.1
Competence/damage-inducible protein cinA; InterPro IPR001453:IPR008136:IPR008135; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; KEGG: dal:Dalk_4012 competence/damage-inducible protein CinA; SPTR: A1ZUS5 Competence-damage inducible protein; PFAM: CinA domain protein; molybdopterin binding domain; TIGRFAM: competence/damage-inducible protein CinA.
    
  0.616
SMB97578.1
Protein of unknown function DUF490; InterPro IPR007452; KEGG: xau:Xaut_4225 hypothetical protein; SPTR: A1ZTE7 Putative uncharacterized protein; PFAM: protein of unknown function DUF490.
  
     0.605
SMB84939.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.596
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
  0.586
SMB99177.1
Surface antigen (D15); InterPro IPR000184; COGs: COG4775 Outer membrane protein/protective antigen OMA87; KEGG: sfu:Sfum_0758 surface antigen (D15); SPTR: A3I1U4 Putative uncharacterized protein; PFAM: surface antigen (D15).
  
     0.565
SMC00371.1
Protein of unknown function DUF177; InterPro IPR003772; COGs: COG1399 metal-binding possibly nucleic acid-binding protein; SPTR: A1ZN44 Putative uncharacterized protein; PFAM: protein of unknown function DUF177.
  
     0.542
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.