STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB81679.1Hypothetical protein; InterPro IPR010916. (294 aa)    
Predicted Functional Partners:
SMB81731.1
KEGG: lch:Lcho_3430 filamentous haemagglutinin outer membrane protein; SPTR: A3I2V1 Putative uncharacterized protein (Fragment).
 
      0.860
SMB98732.1
Glutamate synthase (NADH) large subunit; InterPro IPR002489:IPR002932:IPR000583:IPR006982; COGs: COG0069 Glutamate synthase domain 2; KEGG: pha:PSHAb0127 glutamate synthase, large subunit, GOGAT; SPTR: A0YCV7 Putative glutamate synthase, ferredoxin-dependent; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II; glutamate synthase; PRIAM: Glutamate synthase (ferredoxin).
    
  0.731
SMB98737.1
InterPro IPR000583; COGs: COG0067 Glutamate synthase domain 1; KEGG: cps:CPS_0761 putative glutamate synthase, ferredoxin-dependent; SPTR: A0YCV7 Putative glutamate synthase, ferredoxin-dependent; PFAM: glutamine amidotransferase class-II; PRIAM: Glutamate synthase (ferredoxin).
    
  0.731
SMB98804.1
Cytochrome-c peroxidase; InterPro IPR004852:IPR009056; COGs: COG1858 Cytochrome c peroxidase; KEGG: mpo:Mpop_2895 cytochrome-c peroxidase; SPTR: A1ZRM6 Methylamine utilization protein/CytoChrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase.
  
 
 0.725
SMC00522.1
KEGG: avi:Avi_5260 hypothetical protein.
  
 
   0.710
SMB95875.1
Hypothetical protein; InterPro IPR007110; KEGG: CG31439 gene product from transcript CG31439-RA (EC:3.-.-.-); SPTR: Q8IMS9 CG31439.
  
 
   0.640
SMB84939.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.608
SMC00254.1
Competence/damage-inducible protein cinA; InterPro IPR001453:IPR008136:IPR008135; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; KEGG: dal:Dalk_4012 competence/damage-inducible protein CinA; SPTR: A1ZUS5 Competence-damage inducible protein; PFAM: CinA domain protein; molybdopterin binding domain; TIGRFAM: competence/damage-inducible protein CinA.
    
  0.588
SMC00032.1
OmpA/MotB domain protein; InterPro IPR006664:IPR011659:IPR006665:IPR013026; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; KEGG: hypothetical protein; K03640 peptidoglycan-associated lipoprotein; SPTR: A3HZL6 Peptidoglycan associated periplasmic protein; PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller.
   
   0.565
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.557
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.