STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB98168.1KEGG: gur:Gura_1816 Ig family protein; SPTR: A1ZQF7 Putative uncharacterized protein. (1048 aa)    
Predicted Functional Partners:
SMB98217.1
KEGG: sfu:Sfum_4007 hypothetical protein; SPTR: A1ZEG7 Putative uncharacterized protein.
  
     0.749
SMB98635.1
Hypothetical protein; KEGG: sde:Sde_3094 GntR family transcriptional regulator; SPTR: A5ZFT4 Putative uncharacterized protein.
   
  0.701
SMB87410.1
WD40 domain protein beta Propeller; InterPro IPR011659; KEGG: hypothetical protein; SPTR: A1ZR83 Putative uncharacterized protein; PFAM: WD40 domain protein beta Propeller.
  
    0.684
SMB84477.1
Surface antigen (D15); InterPro IPR000184:IPR010827; COGs: COG4775 Outer membrane protein/protective antigen OMA87; KEGG: eba:ebA1189 hypothetical protein; SPTR: A1ZTV3 Outer membrane protein, OMP85 family, putative; PFAM: surface antigen (D15); surface antigen variable number repeat protein.
  
     0.682
SMB83194.1
Radical SAM domain protein; InterPro IPR007197; COGs: COG0535 Fe-S oxidoreductase; KEGG: cbg:CbuG_1165 radical SAM superfamily protein; SPTR: A1ZRP0 Radical SAM domain protein, putative; PFAM: Radical SAM domain protein.
  
     0.666
SMB97481.1
Hypothetical protein; SPTR: A1ZSY0 Putative uncharacterized protein.
  
     0.657
SMB98216.1
Hypothetical protein; SPTR: A1ZEG6 Putative uncharacterized protein.
  
     0.641
SMB82183.1
Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
  
     0.617
SMB87289.1
Hypothetical protein; SPTR: A1ZT67 Putative uncharacterized protein.
  
     0.589
SMB89593.1
Hypothetical protein; SPTR: A1ZR17 Putative uncharacterized protein.
  
     0.576
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.