STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00608.1Transposase Tn3 family protein; InterPro IPR002513; COGs: COG4644 Transposase and inactivated derivatives TnpA family; KEGG: maq:Maqu_3983 transposase Tn3 family protein; SPTR: P51565 Transposase for transposon Tn1721; PFAM: transposase Tn3 family protein. (991 aa)    
Predicted Functional Partners:
SMC00607.1
Resolvase domain; InterPro IPR006120:IPR006119:IPR006118; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; KEGG: xfa:XF2028 DNA invertase; SPTR: A2UVQ2 Resolvase-like; PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein.
 
     0.801
SMC00646.1
Resolvase domain; InterPro IPR006119; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; KEGG: aba:Acid345_1138 resolvase-like; SPTR: A3XDT4 DNA integration/recombination/invertion protein; PFAM: Resolvase domain.
  
     0.560
SMB79610.1
Resolvase domain; InterPro IPR006119:IPR006118; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; KEGG: pap:PSPA7_0108 hypothetical protein; SPTR: A2UVQ2 Resolvase-like; PFAM: Resolvase domain.
 
     0.533
SMB80850.1
Resolvase domain; InterPro IPR006120:IPR006119:IPR006118; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; SPTR: A2UVQ2 Resolvase-like; PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: aav:Aave_2944 resolvase domain-containing protein.
 
     0.504
SMB79560.1
Integrase family protein; InterPro IPR002104; COGs: COG4974 Site-specific recombinase XerD; KEGG: pub:SAR11_1019 integrase/recombinase XerD-like protein; SPTR: O50655 Integrase/recombinase xerD homolog; PFAM: integrase family protein; Belongs to the 'phage' integrase family.
  
     0.450
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.