STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00666.1Hypothetical protein; KEGG: rso:RSc0115 putative hemagglutinin-related protein; SPTR: A4AP84 Putative hemagglutinin/hemolysin-related protein. (313 aa)    
Predicted Functional Partners:
SMB98635.1
Hypothetical protein; KEGG: sde:Sde_3094 GntR family transcriptional regulator; SPTR: A5ZFT4 Putative uncharacterized protein.
   
  0.701
SMB95875.1
Hypothetical protein; InterPro IPR007110; KEGG: CG31439 gene product from transcript CG31439-RA (EC:3.-.-.-); SPTR: Q8IMS9 CG31439.
  
  
  0.673
SMB95915.1
Hypothetical protein; KEGG: dol:Dole_0131 thioredoxin domain-containing protein; SPTR: A1ZRJ3 Putative uncharacterized protein.
  
 
   0.625
SMB82842.1
Hypothetical protein; SPTR: A1ZCR3 Putative uncharacterized protein.
  
     0.550
SMC00032.1
OmpA/MotB domain protein; InterPro IPR006664:IPR011659:IPR006665:IPR013026; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; KEGG: hypothetical protein; K03640 peptidoglycan-associated lipoprotein; SPTR: A3HZL6 Peptidoglycan associated periplasmic protein; PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller.
 
  0.536
SMC00476.1
COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; KEGG: mca:MCA1563 hypothetical protein; SPTR: A1ZNU9 Gliding motility protein GldG.
  
     0.513
SMB98266.1
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; KEGG: cja:CJA_2760 cellulase, putative, cel5G; SPTR: A4C1X9 Probable glycosyl hydrolase; InterPro IPR005084:IPR001547:IPR006584; SMART: cellulose binding type IV; PFAM: glycoside hydrolase family 5; Carbohydrate binding family 6; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
  0.499
SMB91795.1
Peptidase S8 and S53 subtilisin kexin sedolisin; InterPro IPR000209; COGs: COG1404 Subtilisin-like serine protease; KEGG: geo:Geob_0072 cell wall/surface repeat protein; SPTR: A1ZLS7 Peptidase S8 and S53, subtilisin, kexin, sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin.
   
  0.487
SMB82128.1
OmpA/MotB domain protein; InterPro IPR001035:IPR006664:IPR006665:IPR011659:IPR013026; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; KEGG: hypothetical protein; K03640 peptidoglycan-associated lipoprotein; SPTR: A3HXW3 OmpA family protein; PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller.
 
  0.473
SMB95918.1
TonB-dependent receptor plug; InterPro IPR000531:IPR012910; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; KEGG: mfa:Mfla_1905 TonB-dependent receptor; SPTR: A1ZRJ4 Putative TonB-dependent outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor.
  
 
   0.472
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.