STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB81534.1IS1 transposase; InterPro IPR005063; COGs: COG1662 Transposase and inactivated derivatives IS1 family; KEGG: ftm:FTM_0677 IS1 transposase; SPTR: A0YS55 Putative transposase B; PFAM: IS1 transposase. (128 aa)    
Predicted Functional Partners:
SMB81531.1
Hypothetical protein; SPTR: Q97Y97 Putative uncharacterized protein.
       0.773
SMB80476.1
COGs: COG3415 Transposase and inactivated derivatives; KEGG: cak:Caul_4730 putative transposase of insertion sequence ISRm2011-2, orfA protein; SPTR: A3IMN9 Transposase.
  
     0.473
SMB89544.1
KEGG: lpf:lpl2868 hypothetical protein; SPTR: Q2FSY7 Transposase, IS4.
  
     0.466
SMB79853.1
Transposase; KEGG: vei:Veis_3846 transposase; SPTR: A0B7T1 Transposase.
  
     0.432
SMB95521.1
Protein of unknown function DUF433; InterPro IPR007367; COGs: COG2442 conserved hypothetical protein; KEGG: rpe:RPE_4748 protein of unknown function DUF433; SPTR: A3INV2 Putative uncharacterized protein; PFAM: protein of unknown function DUF433.
  
     0.428
SMB95531.1
COGs: COG4634 conserved hypothetical protein; KEGG: lch:Lcho_4190 hypothetical protein; SPTR: A3Z7C7 Putative uncharacterized protein.
  
     0.425
SMB98819.1
COGs: COG3415 Transposase and inactivated derivatives; KEGG: dsh:Dshi_4037 ISSpo6, transposase orf A; SPTR: A3IMN9 Transposase.
  
     0.414
SMC00251.1
Protein of unknown function DUF820; InterPro IPR008538; COGs: COG4636 conserved hypothetical protein; KEGG: scl:sce5025 hypothetical protein; SPTR: A0ZMA0 Putative uncharacterized protein; PFAM: protein of unknown function DUF820.
  
     0.412
SMC00412.1
Transposase; KEGG: vei:Veis_3846 transposase; SPTR: A0B7T1 Transposase.
  
     0.409
SMC00413.1
KEGG: sat:SYN_03211 transposase and inactivated derivatives; SPTR: A0B7T0 Transposase.
  
     0.403
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.