STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0012ATPase; COGs: COG1373 ATPase (AAA+ superfamily); KEGG: dhd:Dhaf_4874 ATPase; SPTR: ATPase. (406 aa)    
Predicted Functional Partners:
Sgly_0094
Putative GTP-binding protein; COGs: COG1373 ATPase (AAA+ superfamily); KEGG: dhd:Dhaf_0124 putative GTP-binding protein; SPTR: Putative GTP-binding protein.
  
     0.712
Sgly_1023
Hypothetical protein; COGs: COG1373 ATPase (AAA+ superfamily); KEGG: tjr:TherJR_0169 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.607
Sgly_2562
Sortase; KEGG: blj:BLD_1458 sortase; SPTR: Putative uncharacterized protein.
  
     0.533
Sgly_0013
Metallophosphoesterase; COGs: COG4186 phosphoesterase or phosphohydrolase; InterPro IPR004843; KEGG: shi:Shel_05520 predicted phosphoesterase or phosphohydrolase; PFAM: Metallophosphoesterase; SPTR: Predicted phosphoesterase or phosphohydrolase.
       0.421
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.