STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0067KEGG: cfe:CF0654 hypothetical protein. (44 aa)    
Predicted Functional Partners:
Sgly_0068
Peptidase A24A prepilin type IV; InterPro IPR000045; KEGG: dsy:DSY0061 hypothetical protein; PFAM: Peptidase A24A, prepilin type IV; SPTR: Putative uncharacterized protein; PFAM: Type IV leader peptidase family.
       0.773
Sgly_0069
KEGG: dae:Dtox_1483 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
Sgly_0063
KEGG: dsy:DSY0057 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.686
Sgly_0064
COGs: COG0630 Type IV secretory pathway VirB11 protein involved in flagella biosynthesis; InterPro IPR001482; KEGG: dsy:DSY0058 hypothetical protein; PFAM: Type II secretion system protein E; SPTR: Putative uncharacterized protein; PFAM: Type II/IV secretion system protein.
       0.686
Sgly_0065
KEGG: lmy:LM5923_1842 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
       0.686
Sgly_0066
Flp pilus assembly protein CpaB; InterPro IPR013974: IPR017592; KEGG: dsy:DSY0060 hypothetical protein; PFAM: SAF domain; SPTR: Putative uncharacterized protein; TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
       0.686
Sgly_0062
KEGG: dsy:DSY0056 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.681
Sgly_0059
KEGG: dsy:DSY0054 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.666
Sgly_0060
KEGG: hmo:HM1_0591 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.666
Sgly_0061
KEGG: dsy:DSY0055 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.666
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.