STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0277Phosphonate-transporting ATPase; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: psl:Psta_0475 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related-protein; PFAM: ABC transporter. (233 aa)    
Predicted Functional Partners:
Sgly_0983
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ccb:Clocel_3453 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
   0.943
Sgly_1640
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: dsy:DSY3655 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
   0.943
Sgly_1665
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: slp:Slip_0226 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
   0.943
Sgly_1995
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: aoe:Clos_1201 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
 
   0.943
Sgly_0276
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: msv:Mesil_3303 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
   0.904
Sgly_1245
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: cby:CLM_0623 efflux ABC transporter, permease protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
  
 
 0.874
Sgly_2130
Nickel-transporting ATPase; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: apr:Apre_1769 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
 
    
0.832
Sgly_2554
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593: IPR003439: IPR013563: IPR010066; KEGG: cob:COB47_1722 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transpor [...]
 
     
0.813
Sgly_0274
Protein of unknown function DUF214; InterPro IPR003838; KEGG: ccu:Ccur_03260 predicted membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats.
  
 
 0.726
Sgly_1317
Nickel-transporting ATPase; COGs: COG1124 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: dsy:DSY0385 hypothetical protein; PFAM: ABC transporter-like; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
 
    
0.715
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.