STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0597InterPro IPR018035; KEGG: dhd:Dhaf_4148 flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; SPTR: Flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH. (268 aa)    
Predicted Functional Partners:
Sgly_0598
Type III secretion system ATPase, FliI/YscN; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR004100: IPR000194: IPR005714: IPR003593; KEGG: dsy:DSY2986 hypothetical protein; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: H(+)-transporting two-sector ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: flagellar protein export ATPase FliI; ATPase, type III secretion system, FliI/YscN; PFAM: ATP synthase alpha/beta family [...]
  
 
 0.998
Sgly_0603
COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597: IPR001543: IPR012826; KEGG: dhd:Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein; PFAM: Surface presentation of antigen (SpoA); CheC-like protein; SPTR: CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliN.
  
 
 0.997
Sgly_0596
COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: dhd:Dhaf_4149 flagellar motor switch protein G; PFAM: Flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG.
  
 
 0.996
Sgly_0595
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.993
Sgly_0593
COGs: COG1558 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR006299; KEGG: dhd:Dhaf_4152 flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.989
Sgly_0601
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.989
fliE
COGs: COG1677 Flagellar hook-basal body protein; HAMAP: Flagellar hook-basal body complex protein FliE; InterPro IPR001624; KEGG: dsy:DSY2990 hypothetical protein; PFAM: Flagellar hook-basal body complex protein FliE; SPTR: Flagellar hook-basal body complex protein fliE; TIGRFAM: Flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE.
  
  
 0.986
Sgly_0602
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: dhd:Dhaf_4143 flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); SPTR: Flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
  
 
 0.986
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
 
 0.979
Sgly_0622
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.975
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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