STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0773KEGG: sfu:Sfum_1884 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1320). (142 aa)    
Predicted Functional Partners:
Sgly_0774
COGs: COG5005 Mu-like prophage protein gpG; KEGG: btr:Btr_2621 hypothetical protein; SPTR: Phage virion morphogenesis protein; PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein.
       0.805
Sgly_0775
KEGG: sss:SSUSC84_0847 hypothetical protein; SPTR: Putative exported protein.
       0.805
Sgly_0776
COGs: COG3497 Phage tail sheath protein FI; KEGG: cfl:Cfla_2260 tail sheath protein; SPTR: Tail sheath protein; PFAM: Phage tail sheath protein.
       0.746
Sgly_0778
KEGG: hau:Haur_1774 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.725
Sgly_0777
Hypothetical protein; KEGG: emi:Emin_1484 electron transfer flavoprotein alpha subunit; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.697
Sgly_0779
Hypothetical protein; KEGG: erg:ERGA_CDS_08480 putative protease; SPTR: Hypothetical zinc protease.
       0.666
Sgly_0772
Hypothetical protein; KEGG: ljo:LJ0314 Lj965 prophage major head protein; SPTR: Putative uncharacterized protein.
       0.599
Sgly_0770
Hypothetical protein; KEGG: cjr:CJE0244 Mu-like prophage I protein, putative; SPTR: Putative uncharacterized protein; PFAM: Mu-like prophage I protein.
       0.452
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.