STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_0802COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR010067; KEGG: tjr:TherJR_0600 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; SPTR: Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family. (350 aa)    
Predicted Functional Partners:
Sgly_0803
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: tjr:TherJR_0601 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
    0.953
Sgly_0804
Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: tjr:TherJR_0602 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter.
    0.917
Sgly_0807
Urea carboxylase; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR003778: IPR003833: IPR005481: IPR005479: IPR 005482: IPR000089: IPR014084; KEGG: pjd:Pjdr2_2805 UreA carboxylase; PFAM: Allophanate hydrolase subunit 2; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; Biotin/lipoyl attachment; PRIAM: Urea carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; SPTR: Urea carboxylase; TIGRFAM: Urea car [...]
 
   
 0.887
Sgly_0805
Urea carboxylase-associated protein 2; COGs: COG3665 conserved hypothetical protein; InterPro IPR018959: IPR017792; KEGG: pjd:Pjdr2_2803 UreA carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; SPTR: Urea carboxylase-associated protein 2; TIGRFAM: Urea carboxylase-associated protein 2; PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 2.
 
   
 0.860
Sgly_0968
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: tjr:TherJR_0601 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
    0.831
Sgly_0806
COGs: COG3665 conserved hypothetical protein; InterPro IPR018959: IPR017791; KEGG: pjd:Pjdr2_2804 UreA carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; SPTR: Urea carboxylase-associated protein 1; TIGRFAM: Urea carboxylase-associated protein 1; PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 1.
 
   
 0.825
Sgly_0808
Allophanate hydrolase; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120; KEGG: pjd:Pjdr2_2806 allophanate hydrolase; PFAM: Amidase; PRIAM: Allophanate hydrolase; SPTR: Allophanate hydrolase; PFAM: Amidase; TIGRFAM: allophanate hydrolase.
 
   
 0.776
Sgly_0969
Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: tjr:TherJR_0602 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Taurine ABC transporter, ATP-binding protein; PFAM: ABC transporter.
 
    0.672
Sgly_1538
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: geo:Geob_1660 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
    0.627
Sgly_2148
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: dhd:Dhaf_3643 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
    0.580
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.