STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_1105Amino acid ABC transporter membrane protein 2, PAAT family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065: IPR000515; KEGG: bmd:BMD_1575 putative amino acid ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative amino acid ABC transporter, permease protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, [...] (239 aa)    
Predicted Functional Partners:
Sgly_1114
Amino acid ABC transporter ATP-binding protein, PAAT family; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: lsp:Bsph_4684 amino-acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Probable amino-acid ABC transporter ATP-binding protein; PFAM: ABC transporter.
 0.998
Sgly_1107
Amino acid ABC transporter substrate-binding protein, PAAT family; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: bmq:BMQ_1595 putative amino acid ABC transporter, amino acid-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Putative amino acid ABC transporter, amino acid-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3.
 0.996
Sgly_1106
Amino acid ABC transporter membrane protein 1, PAAT family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065: IPR000515; KEGG: bmq:BMQ_1594 putative amino acid ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative amino acid ABC transporter, permease protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease [...]
 
  
 
0.976
Sgly_0603
COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597: IPR001543: IPR012826; KEGG: dhd:Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein; PFAM: Surface presentation of antigen (SpoA); CheC-like protein; SPTR: CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliN.
    
   0.528
Sgly_2809
Phosphonate-transporting ATPase; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
   
 0.490
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
 
  0.487
Sgly_0158
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: vpr:Vpar_0238 ABC-3 protein; PFAM: ABC-3; SPTR: ABC-3 protein; PFAM: ABC 3 transport family.
   
 
 0.438
Sgly_2702
Glutamate synthase (NADH) large subunit; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583: IPR006982: IPR002932: IPR002489; KEGG: dae:Dtox_3758 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin); PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
   
  
 0.423
Sgly_1108
KEGG: tsi:TSIB_0170 hypothetical protein; SPTR: Putative uncharacterized protein.
   
   0.400
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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