STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_1204Response regulator receiver; InterPro IPR001789; KEGG: dhd:Dhaf_0512 response regulator receiver and SARP domain protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain. (135 aa)    
Predicted Functional Partners:
Sgly_2288
KEGG: dhd:Dhaf_4294 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PEGA domain.
  
     0.671
Sgly_2002
KEGG: dae:Dtox_2058 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.651
Sgly_0104
KEGG: dhd:Dhaf_3329 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.587
Sgly_1205
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: ere:EUBREC_2448 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
 
     0.583
Sgly_1567
Glycosyl transferase family 2; InterPro IPR001173; KEGG: cby:CLM_2267 hypothetical protein; PFAM: Glycosyl transferase, family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
  
     0.581
Sgly_1557
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: cby:CLM_2267 hypothetical protein; PFAM: Glycosyl transferase, family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
  
     0.563
Sgly_1848
Plasmid segregation actin-type ATPase ParM; KEGG: dhd:Dhaf_3280 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.560
Sgly_1565
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cbi:CLJ_B2268 hypothetical protein; PFAM: Glycosyl transferase, family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
  
     0.541
Sgly_2746
KEGG: dhd:Dhaf_3329 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.518
Sgly_1285
KEGG: dhd:Dhaf_2665 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.510
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.