STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_1341COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ere:EUBREC_1928 iron compound ABC transporter, permease protein, putative; PFAM: Bacterial transport system permease protein; SPTR: Putative uncharacterized protein; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (343 aa)    
Predicted Functional Partners:
Sgly_1342
Iron-chelate-transporting ATPase; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: ere:EUBREC_1927 ferric enterobactin transport ATP-binding protein FepC; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
 
 0.990
Sgly_1340
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: shi:Shel_24460 ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein; SPTR: Putative ferrichrome-binding periplasmic protein; PFAM: Periplasmic binding protein.
 
 
 0.985
Sgly_1488
Iron-chelate-transporting ATPase; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: sez:Sez_0375 heme ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
 
 0.960
Sgly_3099
Phosphonate-transporting ATPase; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: clj:CLJU_c38030 putative iron ABC transporter ATPase; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Predicted iron ABC transporter, ATPase component; PFAM: ABC transporter.
 
 0.959
Sgly_1339
KEGG: ere:EUBREC_1930 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.932
Sgly_3098
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: clj:CLJU_c38000 putative metal ion (Fe 3+) ABC transporter ATPase; PFAM: Periplasmic binding protein; SPTR: Predicted metal ion (Fe 3+) ABC transporter, ATPase component; PFAM: Periplasmic binding protein.
 
 
 0.881
Sgly_1338
KEGG: shi:Shel_24810 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.874
Sgly_1486
Heme ABC transporter, heme-binding protein isdE; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491: IPR019957; KEGG: sez:Sez_0373 ferrichrome ABC transporter heme substrate-binding lipoprotein; PFAM: Periplasmic binding protein; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter, haem-binding protein IsdE; PFAM: Periplasmic binding protein; TIGRFAM: heme ABC transporter, heme-binding protein isdE.
 
 
 0.871
Sgly_2715
KEGG: cdl:CDR20291_2059 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.796
Sgly_1337
Sirohydrochlorin cobaltochelatase; COGs: COG4822 Cobalamin biosynthesis protein CbiK Co2+ chelatase; InterPro IPR010388; KEGG: mru:mru_0895 cobalt chelatase CbiK; PFAM: Anaerobic cobalt chelatase; PRIAM: Sirohydrochlorin cobaltochelatase; SPTR: Putative uncharacterized protein; PFAM: Cobalt chelatase (CbiK).
 
     0.648
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.