STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_1439Extracellular solute-binding protein family 3; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR001638; KEGG: cth:Cthe_1570 extracellular solute-binding protein; SMART: Extracellular solute-binding protein, family 3; SPTR: Extracellular solute-binding protein, family 3; PFAM: NMT1/THI5 like. (346 aa)    
Predicted Functional Partners:
Sgly_1440
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: cth:Cthe_1571 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
    0.943
Sgly_1441
Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cth:Cthe_1572 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
    0.940
Sgly_1437
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: cth:Cthe_1566 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
    0.833
Sgly_1436
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: cth:Cthe_1565 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.823
Sgly_1539
Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: clj:CLJU_c18320 putative nitrate/sulfonate/bicarbonate ABC transporter ATPase; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Predicted ABC nitrate/sulfonate/bicarbonate family transporter, ATPase component; PFAM: ABC transporter.
  
    0.705
Sgly_2147
Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: dar:Daro_0079 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Taurine ABC transporter, ATP-binding protein; PFAM: ABC transporter.
  
    0.671
Sgly_1015
Taurine-transporting ATPase; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: mja:MJ_0412 nitrate transporter protein NrtC homolog CmpC; PFAM: ABC transporter-like; PRIAM: Taurine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Uncharacterized ABC transporter ATP-binding protein MJ0412; PFAM: ABC transporter.
  
    0.626
Sgly_0994
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: ckr:CKR_0742 hypothetical protein; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Putative uncharacterized protein; PFAM: Nitrogenase component 1 type Oxidoreductase.
  
    0.613
Sgly_0993
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: ckr:CKR_0741 hypothetical protein; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Putative uncharacterized protein; PFAM: Nitrogenase component 1 type Oxidoreductase.
  
    0.606
Sgly_2775
Oxidoreductase/nitrogenase component 1; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: geo:Geob_2500 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase; PFAM: Nitrogenase component 1 type Oxidoreductase.
  
    0.605
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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