STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_1465Protein of unknown function DUF156; COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: ckr:CKR_2414 hypothetical protein; PFAM: Protein of unknown function DUF156; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937. (91 aa)    
Predicted Functional Partners:
Sgly_1466
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR008250: IPR005834: IPR006404: IPR006416: IPR 001757; KEGG: dhd:Dhaf_0093 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolas [...]
 
  
 0.685
Sgly_1985
Protein of unknown function DUF156; COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: apr:Apre_0988 protein of unknown function DUF156; PFAM: Protein of unknown function DUF156; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937.
  
     0.607
Sgly_1986
InterPro IPR006121; KEGG: mla:Mlab_1233 hypothetical protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Putative uncharacterized protein; PFAM: Heavy-metal-associated domain.
  
  
 0.471
Sgly_1521
Cadmium-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR006121: IPR008250: IPR005834: IPR006404: IPR 006416: IPR001757; KEGG: dsy:DSY0829 hypothetical protein; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Cadmium-exporting ATPase; SPTR: Putative uncharacterized protein; TIGRFAM: ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; Heavy-met [...]
  
  
 0.459
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.