STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_1604COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: hiq:CGSHiGG_07880 hypothetical protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase; PFAM: Glycosyl transferase family 2. (298 aa)    
Predicted Functional Partners:
Sgly_1596
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475: IPR003362; KEGG: cth:Cthe_1349 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.878
Sgly_1603
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bpb:bpr_I0818 glycosyl transferase GT4 family protein; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family; PFAM: Glycosyl transferases group 1.
 
    0.825
Sgly_1609
Glycosyl transferase family 2; COGs: COG5039 Exopolysaccharide biosynthesis protein; InterPro IPR001173; KEGG: bfs:BF0187 putative glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide pyruvyl transferase; Glycosyl transferase family 2.
 
    0.797
Sgly_0603
COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597: IPR001543: IPR012826; KEGG: dhd:Dhaf_4142 CheC, inhibitor of MCP methylation / FliN fusion protein; PFAM: Surface presentation of antigen (SpoA); CheC-like protein; SPTR: CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein FliN.
    
   0.696
Sgly_1602
Glycosyl transferase family 2; InterPro IPR001173; KEGG: bpb:bpr_I0813 glycosyl transferase GT2 family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.
 
    0.695
Sgly_1605
KEGG: she:Shewmr4_1324 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.688
Sgly_1606
Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: cpy:Cphy_1209 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.646
Sgly_1601
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pjd:Pjdr2_0405 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
 
    0.582
Sgly_3335
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bca:BCE_3442 glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2; PFAM: Glycosyl transferase family 2.
  
    0.498
Sgly_1515
Undecaprenyl-phosphate galactose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: bcb:BCB4264_A5394 glucosyltransferase EpsB; PFAM: Bacterial sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Glucosyltransferase EpsB; PFAM: Bacterial sugar transferase.
 
  
 0.486
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.