STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_1708TOPRIM domain-containing protein; InterPro IPR006171: IPR006154; KEGG: aac:Aaci_0350 toprim domain protein; PFAM: Toprim domain; SMART: Toprim domain, subgroup; SPTR: TOPRIM domain protein; PFAM: Toprim domain. (112 aa)    
Predicted Functional Partners:
Sgly_0626
COGs: COG4862 Negative regulator of genetic competence sporulation and motility; InterPro IPR008681; KEGG: dhd:Dhaf_4102 negative regulator of genetic competence; PFAM: Negative regulator of genetic competence; SPTR: Negative regulator of genetic competence; PFAM: Negative regulator of genetic competence (MecA).
  
     0.737
Sgly_1829
Abortive infection protein; InterPro IPR003675; KEGG: bha:BH1608 hypothetical protein; PFAM: Abortive infection protein; SPTR: BH1608 protein; PFAM: CAAX amino terminal protease family.
  
     0.711
Sgly_3180
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: dhd:Dhaf_4289 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Hrd4-2; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.572
Sgly_1707
Iron sulfur domain-containing, CDGSH-type; COGs: COG3592 conserved hypothetical protein; InterPro IPR018967: IPR006622; KEGG: mmh:Mmah_0480 protein of unknown function DUF1271; PFAM: Iron sulphur-containing domain, CDGSH-type; SPTR: Putative uncharacterized protein; PFAM: Iron-binding zinc finger CDGSH type; Protein of unknown function (DUF1271).
       0.536
Sgly_0171
Protein of unknown function DUF972; COGs: COG4467 conserved hypothetical protein; InterPro IPR010377; KEGG: dsy:DSY0124 hypothetical protein; PFAM: Protein of unknown function DUF972; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF972).
 
     0.529
Sgly_3219
Hypothetical protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; KEGG: dsy:DSY4846 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.528
Sgly_1709
KEGG: dhd:Dhaf_3364 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.516
Sgly_0636
Beta-galactosidase/beta-glucuronidase-like protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; KEGG: dhd:Dhaf_4077 beta-galactosidase/beta-glucuronidase-like protein; SPTR: Putative uncharacterized protein; PFAM: domain.
  
     0.478
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
 
     0.476
Sgly_2998
Glycoside hydrolase family 18; COGs: COG3858 glycosyl hydrolase; InterPro IPR007253: IPR001223: IPR011583; KEGG: dhd:Dhaf_4489 glycoside hydrolase family 18; PFAM: Glycoside hydrolase, family 18, catalytic domain; Putative cell wall binding repeat 2; SMART: Chitinase II; SPTR: Glycoside hydrolase family 18; PFAM: Glycosyl hydrolases family 18; Putative cell wall binding repeat 2.
  
     0.469
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.