STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_1791Replicative DNA helicase loader DnaI; COGs: COG1484 DNA replication protein; InterPro IPR003959: IPR003593; KEGG: dhd:Dhaf_2785 IstB domain protein ATP-binding protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; PFAM: IstB-like ATP binding protein. (241 aa)    
Predicted Functional Partners:
Sgly_1792
Primosome, DnaD subunit; COGs: COG3935 Putative primosome component and related protein; InterPro IPR006343; KEGG: dhd:Dhaf_2786 primosome, DnaD subunit; SPTR: Putative uncharacterized protein; TIGRFAM: DnaD/phage-associated domain; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
 
  
 0.928
Sgly_3345
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.761
Sgly_2119
SpoIID/LytB domain protein; COGs: COG2385 Sporulation protein and related protein; InterPro IPR013486: IPR013693; KEGG: dhd:Dhaf_3624 SpoIID/LytB domain protein; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal; SPTR: SpoIID/LytB domain protein; TIGRFAM: Sporulation stage II protein D, amidase enhancer LytB; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain.
   
    0.703
Sgly_1912
Sporulation stage III protein AF; InterPro IPR014245; KEGG: dhd:Dhaf_3511 hypothetical protein; PFAM: Sporulation stage III, protein AF; SPTR: Putative uncharacterized protein; PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF.
  
     0.595
Sgly_1709
KEGG: dhd:Dhaf_3364 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.583
Sgly_0196
PRC-barrel domain protein; COGs: COG3881 conserved hypothetical protein; InterPro IPR007903; KEGG: dhd:Dhaf_0118 PRC-barrel domain protein; PFAM: PRC-barrel; SPTR: Putative uncharacterized protein; PFAM: PRC-barrel domain.
  
     0.525
Sgly_1790
KEGG: dhd:Dhaf_2784 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.510
Sgly_2399
Protein of unknown function DUF633; COGs: COG2384 SAM-dependent methyltransferase; InterPro IPR006901; KEGG: dsy:DSY3046 hypothetical protein; PFAM: Protein of unknown function DUF633; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF633).
 
     0.501
Sgly_3295
KEGG: dhd:Dhaf_4840 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.496
Sgly_3348
InterPro IPR018710; KEGG: dhd:Dhaf_4932 hypothetical protein; PFAM: Protein of unknown function DUF2232, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2232).
  
     0.474
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.