STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Sgly_1899COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; InterPro IPR003813; KEGG: hmo:HM1_2009 methyl-viologen-reducing hydrogenase domain protein, subunit d, putative; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; SPTR: Methyl-viologen-reducing hydrogenase domain protein, subunit d, putative; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit. (148 aa)    
Predicted Functional Partners:
Sgly_1898
KEGG: mta:Moth_0814 4Fe-4S ferredoxin, iron-sulfur binding; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding.
  
  0.999
Sgly_1900
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR003953; KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Heterodisulfide reductase, subunit A, selenocysteine-containing; PFAM: FAD binding domain.
 0.999
Sgly_1901
COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: mta:Moth_0810 hypothetical protein; PFAM: Cysteine-rich domain; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich domain.
 
 0.999
Sgly_1902
4Fe-4S ferredoxin, iron-sulfur binding protein; COGs: COG1150 Heterodisulfide reductase subunit C; KEGG: mta:Moth_0809 4Fe-4S ferredoxin, iron-sulfur binding; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding.
 
 0.997
Sgly_1896
Oxidoreductase FAD/NAD(P)-binding domain protein; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR008333: IPR001433: IPR019480; KEGG: mta:Moth_0816 oxidoreductase FAD/NAD(P)-binding; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Oxidoreductase FAD/NAD(P)-binding; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain.
 
 
 0.965
Sgly_1897
KEGG: hmo:HM1_2011 4fe-4S ferredoxin, iron-sulfur binding protein, putative; SPTR: 4fe-4S ferredoxin, iron-sulfur binding protein, putative; TIGRFAM: sulfite reductase, subunit A.
 
 
   0.944
Sgly_1508
InterPro IPR007525; KEGG: amt:Amet_0212 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal; SPTR: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I); PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
  
 
 0.725
Sgly_1608
InterPro IPR007525; KEGG: bth:BT_0386 putative F420H2-dehydrogenase; PFAM: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal; SPTR: Coenzyme F420-reducing hydrogenase, beta subunit; PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
  
 
 0.725
Sgly_3322
Trimethylamine-N-oxide reductase (cytochrome c); COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963: IPR006656: IPR006657; KEGG: dsy:DSY5019 putative anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: Putative anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdop [...]
  
 
 0.724
Sgly_2702
Glutamate synthase (NADH) large subunit; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583: IPR006982: IPR002932: IPR002489; KEGG: dae:Dtox_3758 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin); PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
   
   0.676
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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