STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_2038Hypothetical protein; KEGG: dol:Dole_2286 YadA domain-containing protein; SPTR: Putative uncharacterized protein. (414 aa)    
Predicted Functional Partners:
Sgly_2039
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR019734: IPR001173: IPR001440; KEGG: clj:CLJU_c04550 putative glycosyltransferase; PFAM: Glycosyl transferase, family 2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; Tetratricopeptide repeat.
 
     0.683
Sgly_0730
Abortive infection protein; InterPro IPR003675; KEGG: dhd:Dhaf_1562 abortive infection protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; PFAM: CAAX amino terminal protease family.
    
   0.511
Sgly_1689
Abortive infection protein; InterPro IPR003675; KEGG: dhd:Dhaf_3388 abortive infection protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; PFAM: CAAX amino terminal protease family.
    
   0.511
Sgly_1829
Abortive infection protein; InterPro IPR003675; KEGG: bha:BH1608 hypothetical protein; PFAM: Abortive infection protein; SPTR: BH1608 protein; PFAM: CAAX amino terminal protease family.
    
   0.511
Sgly_2037
KEGG: ttm:Tthe_2064 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.475
Sgly_2036
KEGG: ttm:Tthe_2064 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.429
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.