STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_2200KEGG: dhd:Dhaf_3096 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: HD domain. (164 aa)    
Predicted Functional Partners:
Sgly_3219
Hypothetical protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; KEGG: dsy:DSY4846 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.733
Sgly_0636
Beta-galactosidase/beta-glucuronidase-like protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; KEGG: dhd:Dhaf_4077 beta-galactosidase/beta-glucuronidase-like protein; SPTR: Putative uncharacterized protein; PFAM: domain.
  
     0.691
Sgly_1848
Plasmid segregation actin-type ATPase ParM; KEGG: dhd:Dhaf_3280 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.676
Sgly_2077
InterPro IPR019734: IPR001440; KEGG: dhd:Dhaf_3010 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
  
     0.636
Sgly_2470
InterPro IPR007227; KEGG: dhd:Dhaf_4349 rod shape-determining protein MreD; PFAM: Cell shape-determining protein MreD; SPTR: Putative uncharacterized protein; TIGRFAM: Cell shape-determining protein MreD; PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.
  
     0.631
Sgly_2067
Hypothetical protein; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; KEGG: dsy:DSY1832 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.618
Sgly_0629
Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: dhd:Dhaf_4099 protein of unknown function DUF342; PFAM: Protein of unknown function DUF342; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF342).
  
     0.605
Sgly_3003
Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: dsy:DSY3339 hypothetical protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein.
  
     0.596
Sgly_1850
KEGG: tjr:TherJR_0420 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.567
Sgly_1867
COGs: COG1832 CoA-binding protein; KEGG: dhd:Dhaf_3444 CoA-binding protein-like protein; SPTR: CoA-binding protein-like protein.
  
     0.566
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.