STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgly_2335COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460; KEGG: dhd:Dhaf_3845 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; SPTR: Putative uncharacterized protein; PFAM: Penicillin binding protein transpeptidase domain. (472 aa)    
Predicted Functional Partners:
Sgly_2336
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: dhd:Dhaf_3846 cell cycle protein; PFAM: Cell cycle protein; SPTR: Putative uncharacterized protein; PFAM: Cell cycle protein; Belongs to the SEDS family.
 
 0.998
Sgly_0647
Cell division-specific peptidoglycan biosynthesis regulator FtsW; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182: IPR013437; KEGG: dsy:DSY2908 hypothetical protein; PFAM: Cell cycle protein; SPTR: Putative uncharacterized protein; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; stage V sporulation protein E; cell division protein FtsW; Belongs to the SEDS family.
 
 0.978
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 0.964
Sgly_1693
Cell division-specific peptidoglycan biosynthesis regulator FtsW; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR013437: IPR001182; KEGG: dsy:DSY2254 hypothetical protein; PFAM: Cell cycle protein; SPTR: Putative uncharacterized protein; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; Belongs to the SEDS family.
 
 0.953
Sgly_2338
COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: dhd:Dhaf_3848 FHA domain containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated; SPTR: Putative uncharacterized protein; PFAM: FHA domain.
 
   
 0.943
Sgly_2337
COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR014045: IPR001932; KEGG: dhd:Dhaf_3847 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related; SPTR: Putative uncharacterized protein; PFAM: Protein phosphatase 2C.
  
 0.926
Sgly_2339
COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: dhd:Dhaf_3849 FHA domain containing protein; PFAM: Forkhead-associated; SMART: Forkhead-associated; SPTR: FHA domain containing protein; PFAM: Protein of unknown function (DUF2662); FHA domain.
 
   
 0.917
Sgly_2334
COGs: COG0515 Serine/threonine protein kinase; InterPro IPR017442: IPR005543: IPR020635: IPR002290; KEGG: dhd:Dhaf_3844 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; PASTA; PRIAM: Mitogen-activated protein kinase kinase kinase; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; PASTA; SPTR: Putative uncharacterized protein; PFAM: Protein kinase domain; PASTA domain.
  
  
 0.894
rlmN
23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
     
 0.808
Sgly_0189
Cyanophycin synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR003135: IPR013651: IPR013221: IPR004101: IPR 011810; KEGG: dsy:DSY0146 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; ATP-grasp fold, RimK-type; Mur ligase, C-terminal; PRIAM: Cyanophycin synthase (L-aspartate-adding); SPTR: Putative uncharacterized protein; TIGRFAM: Cyanophycin synthetase; PFAM: Mur ligase family, glutamate ligase domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Mur ligase middle domain; TIGRFAM: [...]
 
 
 0.738
Your Current Organism:
Syntrophobotulus glycolicus
NCBI taxonomy Id: 645991
Other names: S. glycolicus DSM 8271, Syntrophobotulus glycolicus DSM 8271, Syntrophobotulus glycolicus str. DSM 8271, Syntrophobotulus glycolicus strain DSM 8271
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